Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.34□□□□□ -0.11
Pkp4Q68FH0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pkp4Q68FH0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gm5864-201ENSMUST00000202263 970 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gm10060-201ENSMUST00000212002 111 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp4Q68FH0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Gm28659-201ENSMUST00000188013 759 ntBASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp4Q68FH0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pkp4Q68FH0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms