Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.63■□□□□ 0.41
Ctr9Q62018 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.63■□□□□ 0.41
Ctr9Q62018 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctr9Q62018 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 BC037039-201ENSMUST00000192003 2205 ntBASIC17.62■□□□□ 0.41
Ctr9Q62018 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.62■□□□□ 0.41
Ctr9Q62018 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Gm8396-201ENSMUST00000057361 823 ntBASIC17.62■□□□□ 0.41
Ctr9Q62018 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ctr9Q62018 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctr9Q62018 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.61■□□□□ 0.41
Ctr9Q62018 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Rprl2-201ENSMUST00000157150 290 ntBASIC17.61■□□□□ 0.41
Ctr9Q62018 Gm18889-201ENSMUST00000174284 929 ntBASIC17.61■□□□□ 0.41
Ctr9Q62018 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctr9Q62018 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.61■□□□□ 0.41
Ctr9Q62018 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Gm14701-201ENSMUST00000117156 348 ntBASIC17.6■□□□□ 0.41
Ctr9Q62018 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Mir6990-201ENSMUST00000183724 91 ntBASIC17.6■□□□□ 0.41
Ctr9Q62018 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ctr9Q62018 Gm18057-201ENSMUST00000208220 503 ntBASIC17.6■□□□□ 0.41
Ctr9Q62018 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.6■□□□□ 0.41
Ctr9Q62018 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctr9Q62018 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms