Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox17Q61473 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sox17Q61473 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox17Q61473 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox17Q61473 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.08□□□□□ -0.16
Sox17Q61473 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.08□□□□□ -0.16
Sox17Q61473 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox17Q61473 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox17Q61473 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox17Q61473 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox17Q61473 Celf4-206ENSMUST00000224553 1729 ntBASIC14.07□□□□□ -0.16
Sox17Q61473 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox17Q61473 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox17Q61473 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox17Q61473 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox17Q61473 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.07□□□□□ -0.16
Sox17Q61473 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.07□□□□□ -0.16
Sox17Q61473 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox17Q61473 Acot6-202ENSMUST00000222921 3622 ntBASIC14.07□□□□□ -0.16
Sox17Q61473 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox17Q61473 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox17Q61473 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox17Q61473 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox17Q61473 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox17Q61473 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.06□□□□□ -0.16
Sox17Q61473 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.06□□□□□ -0.16
Sox17Q61473 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.06□□□□□ -0.16
Sox17Q61473 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.06□□□□□ -0.16
Sox17Q61473 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Sox17Q61473 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox17Q61473 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox17Q61473 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox17Q61473 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Sox17Q61473 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms