Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clcn4Q61418 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn4Q61418 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Clcn4Q61418 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.81□□□□□ -0.2
Clcn4Q61418 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn4Q61418 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Clcn4Q61418 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
Clcn4Q61418 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcn4Q61418 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.8□□□□□ -0.2
Clcn4Q61418 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcn4Q61418 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Gm5867-201ENSMUST00000063197 592 ntBASIC13.8□□□□□ -0.2
Clcn4Q61418 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcn4Q61418 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn4Q61418 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.79□□□□□ -0.2
Clcn4Q61418 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Gm4535-201ENSMUST00000182274 558 ntBASIC13.79□□□□□ -0.2
Clcn4Q61418 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.79□□□□□ -0.2
Clcn4Q61418 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Gm10355-201ENSMUST00000097146 517 ntBASIC13.79□□□□□ -0.2
Clcn4Q61418 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms