Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.5■□□□□ 0.23
Col11a1Q61245 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gm17795-201ENSMUST00000214505 757 ntBASIC16.5■□□□□ 0.23
Col11a1Q61245 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.5■□□□□ 0.23
Col11a1Q61245 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Col11a1Q61245 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.5■□□□□ 0.23
Col11a1Q61245 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Col11a1Q61245 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a1Q61245 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.49■□□□□ 0.23
Col11a1Q61245 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.49■□□□□ 0.23
Col11a1Q61245 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.49■□□□□ 0.23
Col11a1Q61245 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col11a1Q61245 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a1Q61245 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col11a1Q61245 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Col11a1Q61245 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.48■□□□□ 0.23
Col11a1Q61245 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.48■□□□□ 0.23
Col11a1Q61245 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.48■□□□□ 0.23
Col11a1Q61245 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.48■□□□□ 0.23
Col11a1Q61245 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a1Q61245 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col11a1Q61245 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.48■□□□□ 0.23
Col11a1Q61245 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.47■□□□□ 0.23
Col11a1Q61245 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.47■□□□□ 0.23
Col11a1Q61245 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.47■□□□□ 0.23
Col11a1Q61245 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col11a1Q61245 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms