Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cln3Q61124 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Gm2451-201ENSMUST00000199447 999 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Gm10290-201ENSMUST00000200451 999 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Gm46209-201ENSMUST00000217912 553 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Gm16476-201ENSMUST00000221544 139 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Dupd1-202ENSMUST00000224735 548 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.34■□□□□ 0.21
Cln3Q61124 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cln3Q61124 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln3Q61124 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln3Q61124 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln3Q61124 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cln3Q61124 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Cln3Q61124 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln3Q61124 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Cln3Q61124 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Cln3Q61124 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.33■□□□□ 0.2
Cln3Q61124 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.33■□□□□ 0.2
Cln3Q61124 Gm12859-201ENSMUST00000117834 427 ntBASIC16.33■□□□□ 0.2
Cln3Q61124 Gm14928-201ENSMUST00000120198 477 ntBASIC16.33■□□□□ 0.2
Cln3Q61124 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cln3Q61124 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cln3Q61124 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.33■□□□□ 0.2
Cln3Q61124 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
Cln3Q61124 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.33■□□□□ 0.2
Cln3Q61124 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cln3Q61124 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln3Q61124 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Cln3Q61124 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Gm27631-201ENSMUST00000184163 466 ntBASIC16.32■□□□□ 0.2
Cln3Q61124 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.32■□□□□ 0.2
Cln3Q61124 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.32■□□□□ 0.2
Cln3Q61124 Gm9794-201ENSMUST00000202370 423 ntBASIC16.32■□□□□ 0.2
Cln3Q61124 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.32■□□□□ 0.2
Cln3Q61124 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.32■□□□□ 0.2
Cln3Q61124 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln3Q61124 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Cln3Q61124 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Gm12490-201ENSMUST00000120255 560 ntBASIC16.31■□□□□ 0.2
Cln3Q61124 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms