Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.39□□□□□ -0.11
ClpbQ60649 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ClpbQ60649 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.39□□□□□ -0.11
ClpbQ60649 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ClpbQ60649 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.39□□□□□ -0.11
ClpbQ60649 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.39□□□□□ -0.11
ClpbQ60649 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ClpbQ60649 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ClpbQ60649 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ClpbQ60649 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.38□□□□□ -0.11
ClpbQ60649 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ClpbQ60649 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.38□□□□□ -0.11
ClpbQ60649 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.38□□□□□ -0.11
ClpbQ60649 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.38□□□□□ -0.11
ClpbQ60649 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.38□□□□□ -0.11
ClpbQ60649 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpbQ60649 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ClpbQ60649 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
ClpbQ60649 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ClpbQ60649 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ClpbQ60649 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ClpbQ60649 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.37□□□□□ -0.11
ClpbQ60649 Gm4899-201ENSMUST00000178708 719 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.37□□□□□ -0.11
ClpbQ60649 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.37□□□□□ -0.11
ClpbQ60649 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ClpbQ60649 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ClpbQ60649 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClpbQ60649 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpbQ60649 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.36□□□□□ -0.11
ClpbQ60649 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms