Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Gm15358-201ENSMUST00000119249 520 ntBASIC14.28□□□□□ -0.12
Nr1h4Q60641 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Gm8318-201ENSMUST00000182954 872 ntBASIC14.28□□□□□ -0.12
Nr1h4Q60641 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Gm8655-201ENSMUST00000221159 852 ntBASIC14.28□□□□□ -0.12
Nr1h4Q60641 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1h4Q60641 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.27□□□□□ -0.12
Nr1h4Q60641 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.27□□□□□ -0.12
Nr1h4Q60641 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1h4Q60641 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1h4Q60641 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Gm15372-201ENSMUST00000120729 834 ntBASIC14.26□□□□□ -0.13
Nr1h4Q60641 Gm6659-201ENSMUST00000174752 547 ntBASIC14.26□□□□□ -0.13
Nr1h4Q60641 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.26□□□□□ -0.13
Nr1h4Q60641 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.26□□□□□ -0.13
Nr1h4Q60641 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.26□□□□□ -0.13
Nr1h4Q60641 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1h4Q60641 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms