Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Gm2423-201ENSMUST00000074863 733 ntBASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Gm29667-201ENSMUST00000190817 490 ntBASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Gm9229-201ENSMUST00000222777 126 ntBASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf1Q5U4C3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 BC001981-202ENSMUST00000191393 1545 ntBASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf1Q5U4C3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Gm22189-201ENSMUST00000103822 86 ntBASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf1Q5U4C3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Mypopos-202ENSMUST00000205975 2321 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms