Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Gm16198-201ENSMUST00000118766 670 ntBASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Rprl2-201ENSMUST00000157150 290 ntBASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trav2Q5R1I9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav2Q5R1I9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav2Q5R1I9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms