Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-2Q5R1I3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-2Q5R1I3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 BC037039-201ENSMUST00000192003 2205 ntBASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-2Q5R1I3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Gm8097-201ENSMUST00000117903 829 ntBASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Gm43347-201ENSMUST00000200226 580 ntBASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Birc2-201ENSMUST00000054878 378 ntBASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-2Q5R1I3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Gm14722-201ENSMUST00000118943 689 ntBASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav7-2Q5R1I3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms