Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm27357-201ENSMUST00000183754 135 ntBASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Gm18669-201ENSMUST00000216049 778 ntBASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav8d-1Q5R1H8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8d-1Q5R1H8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Gm15794-201ENSMUST00000120182 631 ntBASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms