Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5d-4Q5R1F6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm10060-201ENSMUST00000212002 111 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm7787-201ENSMUST00000216858 688 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5d-4Q5R1F6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gm45167-201ENSMUST00000208007 322 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms