Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-3Q5R1E6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gm13418-201ENSMUST00000119097 944 ntBASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-3Q5R1E6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm6089-201ENSMUST00000197666 938 ntBASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms