Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm13312-201ENSMUST00000119631 718 ntBASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm9013-201ENSMUST00000132939 882 ntBASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Celf4-206ENSMUST00000224553 1729 ntBASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms