Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gm13474-201ENSMUST00000122466 815 ntBASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gm18115-201ENSMUST00000221209 621 ntBASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-3Q5R1C3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Gm21814-202ENSMUST00000203277 873 ntBASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.25□□□□□ -0.61
Trav3-3Q5R1C3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-3Q5R1C3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms