Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm44333-201ENSMUST00000197168 107 ntBASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gm5779-201ENSMUST00000218467 910 ntBASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf38aQ4FK66 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf38aQ4FK66 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf38aQ4FK66 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf38aQ4FK66 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38aQ4FK66 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38aQ4FK66 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38aQ4FK66 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms