Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Gm12585-201ENSMUST00000117307 290 ntBASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Gm12957-201ENSMUST00000117835 377 ntBASIC18.35■□□□□ 0.53
Shank3Q4ACU6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Gm15460-201ENSMUST00000118147 391 ntBASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shank3Q4ACU6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank3Q4ACU6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank3Q4ACU6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank3Q4ACU6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank3Q4ACU6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank3Q4ACU6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shank3Q4ACU6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank3Q4ACU6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Gm15393-201ENSMUST00000120499 219 ntBASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Gm9182-201ENSMUST00000217829 639 ntBASIC18.31■□□□□ 0.52
Shank3Q4ACU6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank3Q4ACU6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.3■□□□□ 0.52
Shank3Q4ACU6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms