Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cnga4Q3UW12 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnga4Q3UW12 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnga4Q3UW12 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Gm18032-201ENSMUST00000222541 538 ntBASIC15.2■□□□□ 0.02
Cnga4Q3UW12 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnga4Q3UW12 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms