Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Gm13312-201ENSMUST00000119631 718 ntBASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc190Q3URK1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc190Q3URK1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc190Q3URK1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms