Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a2Q3U962 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.57■□□□□ 0.4
Col5a2Q3U962 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Mir1982-201ENSMUST00000157368 74 ntBASIC17.57■□□□□ 0.4
Col5a2Q3U962 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Dancr-204ENSMUST00000132389 2347 ntBASIC17.57■□□□□ 0.4
Col5a2Q3U962 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.57■□□□□ 0.4
Col5a2Q3U962 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Gm12957-201ENSMUST00000117835 377 ntBASIC17.56■□□□□ 0.4
Col5a2Q3U962 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Gm4984-201ENSMUST00000115987 360 ntBASIC17.56■□□□□ 0.4
Col5a2Q3U962 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Snora78-201ENSMUST00000158630 128 ntBASIC17.56■□□□□ 0.4
Col5a2Q3U962 Gm37230-201ENSMUST00000194491 818 ntBASIC17.56■□□□□ 0.4
Col5a2Q3U962 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.56■□□□□ 0.4
Col5a2Q3U962 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col5a2Q3U962 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.55■□□□□ 0.4
Col5a2Q3U962 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.55■□□□□ 0.4
Col5a2Q3U962 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col5a2Q3U962 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.54■□□□□ 0.4
Col5a2Q3U962 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.54■□□□□ 0.4
Col5a2Q3U962 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm9257-201ENSMUST00000221254 232 ntBASIC17.54■□□□□ 0.4
Col5a2Q3U962 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.54■□□□□ 0.4
Col5a2Q3U962 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms