Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Khdc4Q3TCX3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Khdc4Q3TCX3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Auts2-212ENSMUST00000178555 309 ntBASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Khdc4Q3TCX3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Khdc4Q3TCX3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Khdc4Q3TCX3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms