Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.37□□□□□ -0.43
Trim63Q38HM4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.37□□□□□ -0.43
Trim63Q38HM4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.36□□□□□ -0.43
Trim63Q38HM4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.36□□□□□ -0.43
Trim63Q38HM4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.36□□□□□ -0.43
Trim63Q38HM4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim63Q38HM4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim63Q38HM4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Mir6349-201ENSMUST00000184059 97 ntBASIC12.35□□□□□ -0.43
Trim63Q38HM4 Gm6420-201ENSMUST00000193885 723 ntBASIC12.35□□□□□ -0.43
Trim63Q38HM4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.35□□□□□ -0.43
Trim63Q38HM4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Gm13241-201ENSMUST00000094493 780 ntBASIC12.35□□□□□ -0.43
Trim63Q38HM4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim63Q38HM4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms