Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col1a2Q01149 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col1a2Q01149 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col1a2Q01149 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col1a2Q01149 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.65■□□□□ 0.58
Col1a2Q01149 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.65■□□□□ 0.58
Col1a2Q01149 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.65■□□□□ 0.58
Col1a2Q01149 Gm7775-201ENSMUST00000218871 853 ntBASIC18.65■□□□□ 0.58
Col1a2Q01149 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Col1a2Q01149 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col1a2Q01149 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col1a2Q01149 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col1a2Q01149 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Col1a2Q01149 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm24543-201ENSMUST00000103867 82 ntBASIC18.64■□□□□ 0.57
Col1a2Q01149 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Gm9726-201ENSMUST00000180321 678 ntBASIC18.64■□□□□ 0.57
Col1a2Q01149 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Col1a2Q01149 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col1a2Q01149 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.63■□□□□ 0.57
Col1a2Q01149 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Mir7684-201ENSMUST00000183858 60 ntBASIC18.63■□□□□ 0.57
Col1a2Q01149 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Gm44344-201ENSMUST00000200287 129 ntBASIC18.63■□□□□ 0.57
Col1a2Q01149 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.63■□□□□ 0.57
Col1a2Q01149 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.63■□□□□ 0.57
Col1a2Q01149 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col1a2Q01149 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.62■□□□□ 0.57
Col1a2Q01149 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.62■□□□□ 0.57
Col1a2Q01149 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.62■□□□□ 0.57
Col1a2Q01149 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.62■□□□□ 0.57
Col1a2Q01149 Gm27989-201ENSMUST00000184721 107 ntBASIC18.62■□□□□ 0.57
Col1a2Q01149 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.62■□□□□ 0.57
Col1a2Q01149 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col1a2Q01149 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms