Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh6P97326 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh6P97326 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.18■□□□□ 0.02
Cdh6P97326 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdh6P97326 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdh6P97326 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Thap2-203ENSMUST00000218989 527 ntBASIC15.18■□□□□ 0.02
Cdh6P97326 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.18■□□□□ 0.02
Cdh6P97326 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdh6P97326 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdh6P97326 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh6P97326 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdh6P97326 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh6P97326 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdh6P97326 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.17■□□□□ 0.02
Cdh6P97326 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.17■□□□□ 0.02
Cdh6P97326 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.17■□□□□ 0.02
Cdh6P97326 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh6P97326 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh6P97326 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh6P97326 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.16■□□□□ 0.02
Cdh6P97326 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdh6P97326 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh6P97326 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh6P97326 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdh6P97326 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh6P97326 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh6P97326 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.16■□□□□ 0.02
Cdh6P97326 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdh6P97326 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh6P97326 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh6P97326 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms