Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
PrkdcP97313 Cts7-204ENSMUST00000225321 1257 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.04□□□□□ -0.8
PrkdcP97313 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PrkdcP97313 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.04□□□□□ -0.8
PrkdcP97313 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.04□□□□□ -0.8
PrkdcP97313 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.04□□□□□ -0.8
PrkdcP97313 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
PrkdcP97313 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PrkdcP97313 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.03□□□□□ -0.8
PrkdcP97313 Gm15460-201ENSMUST00000118147 391 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Gm33320-201ENSMUST00000192232 530 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
PrkdcP97313 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PrkdcP97313 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PrkdcP97313 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.03□□□□□ -0.8
PrkdcP97313 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
PrkdcP97313 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Gm15429-201ENSMUST00000151268 798 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
PrkdcP97313 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PrkdcP97313 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.03□□□□□ -0.8
PrkdcP97313 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.03□□□□□ -0.8
PrkdcP97313 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.03□□□□□ -0.8
PrkdcP97313 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PrkdcP97313 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PrkdcP97313 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
PrkdcP97313 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
PrkdcP97313 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC10.02□□□□□ -0.8
PrkdcP97313 Gm13342-201ENSMUST00000121055 207 ntBASIC10.02□□□□□ -0.8
PrkdcP97313 Gm5523-201ENSMUST00000180415 997 ntBASIC10.02□□□□□ -0.8
PrkdcP97313 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.02□□□□□ -0.8
PrkdcP97313 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.02□□□□□ -0.8
PrkdcP97313 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
PrkdcP97313 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.02□□□□□ -0.8
PrkdcP97313 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC10.02□□□□□ -0.8
PrkdcP97313 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.02□□□□□ -0.81
PrkdcP97313 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
PrkdcP97313 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.02□□□□□ -0.81
PrkdcP97313 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.02□□□□□ -0.81
PrkdcP97313 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.02□□□□□ -0.81
PrkdcP97313 Gm43818-201ENSMUST00000200605 466 ntBASIC10.02□□□□□ -0.81
PrkdcP97313 Gm45098-201ENSMUST00000207179 657 ntBASIC10.02□□□□□ -0.81
PrkdcP97313 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
PrkdcP97313 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PrkdcP97313 Gm38266-201ENSMUST00000194931 421 ntBASIC10.02□□□□□ -0.81
PrkdcP97313 Gm43138-201ENSMUST00000199123 708 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms