Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.82□□□□□ -0.04
Shox2P70390 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shox2P70390 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
Shox2P70390 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Shox2P70390 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Shox2P70390 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.81□□□□□ -0.04
Shox2P70390 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Shox2P70390 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.81□□□□□ -0.04
Shox2P70390 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.81□□□□□ -0.04
Shox2P70390 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.81□□□□□ -0.04
Shox2P70390 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shox2P70390 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Shox2P70390 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.81□□□□□ -0.04
Shox2P70390 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Shox2P70390 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Shox2P70390 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.8□□□□□ -0.04
Shox2P70390 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Shox2P70390 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.8□□□□□ -0.04
Shox2P70390 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shox2P70390 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Shox2P70390 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.79□□□□□ -0.04
Shox2P70390 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Shox2P70390 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Shox2P70390 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Shox2P70390 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Shox2P70390 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Shox2P70390 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Shox2P70390 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shox2P70390 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.78□□□□□ -0.04
Shox2P70390 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.78□□□□□ -0.04
Shox2P70390 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shox2P70390 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Shox2P70390 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.78□□□□□ -0.04
Shox2P70390 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms