Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.03□□□□□ -0.16
Six5P70178 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six5P70178 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.02□□□□□ -0.16
Six5P70178 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.02□□□□□ -0.16
Six5P70178 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Six5P70178 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six5P70178 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Six5P70178 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.02□□□□□ -0.17
Six5P70178 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.02□□□□□ -0.17
Six5P70178 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.02□□□□□ -0.17
Six5P70178 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.02□□□□□ -0.17
Six5P70178 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.02□□□□□ -0.17
Six5P70178 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.02□□□□□ -0.17
Six5P70178 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.02□□□□□ -0.17
Six5P70178 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Six5P70178 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six5P70178 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.02□□□□□ -0.17
Six5P70178 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.01□□□□□ -0.17
Six5P70178 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six5P70178 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six5P70178 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.01□□□□□ -0.17
Six5P70178 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six5P70178 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.01□□□□□ -0.17
Six5P70178 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six5P70178 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six5P70178 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six5P70178 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14□□□□□ -0.17
Six5P70178 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14□□□□□ -0.17
Six5P70178 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Six5P70178 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six5P70178 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six5P70178 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms