Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Asic1-205ENSMUST00000228185 1818 ntBASIC15.33■□□□□ 0.04
Ybx1P62960 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ybx1P62960 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ybx1P62960 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ybx1P62960 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ybx1P62960 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ybx1P62960 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ybx1P62960 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Gm8410-201ENSMUST00000117225 605 ntBASIC15.32■□□□□ 0.04
Ybx1P62960 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.32■□□□□ 0.04
Ybx1P62960 Gm5866-201ENSMUST00000177881 973 ntBASIC15.32■□□□□ 0.04
Ybx1P62960 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.32■□□□□ 0.04
Ybx1P62960 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ybx1P62960 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.31■□□□□ 0.04
Ybx1P62960 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.31■□□□□ 0.04
Ybx1P62960 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.31■□□□□ 0.04
Ybx1P62960 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.31■□□□□ 0.04
Ybx1P62960 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.31■□□□□ 0.04
Ybx1P62960 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ybx1P62960 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ybx1P62960 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ybx1P62960 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ybx1P62960 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm13453-201ENSMUST00000118708 357 ntBASIC15.3■□□□□ 0.04
Ybx1P62960 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.3■□□□□ 0.04
Ybx1P62960 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.3■□□□□ 0.04
Ybx1P62960 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm28630-201ENSMUST00000187806 498 ntBASIC15.3■□□□□ 0.04
Ybx1P62960 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
Ybx1P62960 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ybx1P62960 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ybx1P62960 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ybx1P62960 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms