Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cks1bP61025 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1bP61025 Gm2274-201ENSMUST00000184539 609 ntBASIC10.72□□□□□ -0.69
Cks1bP61025 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1bP61025 Gm8520-201ENSMUST00000186517 868 ntBASIC10.72□□□□□ -0.69
Cks1bP61025 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.72□□□□□ -0.69
Cks1bP61025 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cks1bP61025 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cks1bP61025 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1bP61025 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.72□□□□□ -0.69
Cks1bP61025 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.72□□□□□ -0.69
Cks1bP61025 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cks1bP61025 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Cks1bP61025 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1bP61025 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1bP61025 Gm16061-201ENSMUST00000122167 857 ntBASIC10.71□□□□□ -0.69
Cks1bP61025 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.71□□□□□ -0.69
Cks1bP61025 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.71□□□□□ -0.69
Cks1bP61025 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1bP61025 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.71□□□□□ -0.69
Cks1bP61025 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.71□□□□□ -0.69
Cks1bP61025 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.71□□□□□ -0.69
Cks1bP61025 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.71□□□□□ -0.69
Cks1bP61025 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.71□□□□□ -0.69
Cks1bP61025 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1bP61025 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cks1bP61025 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1bP61025 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cks1bP61025 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.7□□□□□ -0.7
Cks1bP61025 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms