Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tm6sf1P58749 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf1P58749 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm2451-201ENSMUST00000199447 999 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 Gm10290-201ENSMUST00000200451 999 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.33■□□□□ 0.52
Tm6sf1P58749 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf1P58749 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tm6sf1P58749 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tm6sf1P58749 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Gm45612-201ENSMUST00000211320 160 ntBASIC18.32■□□□□ 0.52
Tm6sf1P58749 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf1P58749 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf1P58749 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf1P58749 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms