Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.13□□□□□ -0.47
Sssca1P56873 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.13□□□□□ -0.47
Sssca1P56873 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sssca1P56873 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.13□□□□□ -0.47
Sssca1P56873 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sssca1P56873 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sssca1P56873 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Gm15165-201ENSMUST00000118140 502 ntBASIC12.12□□□□□ -0.47
Sssca1P56873 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sssca1P56873 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sssca1P56873 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Sssca1P56873 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.12□□□□□ -0.47
Sssca1P56873 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sssca1P56873 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.11□□□□□ -0.47
Sssca1P56873 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Gm12497-201ENSMUST00000138778 237 ntBASIC12.11□□□□□ -0.47
Sssca1P56873 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Sssca1P56873 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sssca1P56873 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sssca1P56873 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms