Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CckbrP56481 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.89□□□□□ -0.19
CckbrP56481 Gm9727-201ENSMUST00000161387 555 ntBASIC13.89□□□□□ -0.19
CckbrP56481 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CckbrP56481 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.89□□□□□ -0.19
CckbrP56481 Gm43514-201ENSMUST00000198852 424 ntBASIC13.89□□□□□ -0.19
CckbrP56481 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CckbrP56481 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.89□□□□□ -0.19
CckbrP56481 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CckbrP56481 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.89□□□□□ -0.19
CckbrP56481 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CckbrP56481 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.89□□□□□ -0.19
CckbrP56481 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.89□□□□□ -0.19
CckbrP56481 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CckbrP56481 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CckbrP56481 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 BC037039-201ENSMUST00000192003 2205 ntBASIC13.88□□□□□ -0.19
CckbrP56481 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Gm12008-201ENSMUST00000117791 755 ntBASIC13.88□□□□□ -0.19
CckbrP56481 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.88□□□□□ -0.19
CckbrP56481 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.88□□□□□ -0.19
CckbrP56481 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.88□□□□□ -0.19
CckbrP56481 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.88□□□□□ -0.19
CckbrP56481 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.88□□□□□ -0.19
CckbrP56481 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CckbrP56481 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.87□□□□□ -0.19
CckbrP56481 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.87□□□□□ -0.19
CckbrP56481 Gm43767-201ENSMUST00000198933 381 ntBASIC13.87□□□□□ -0.19
CckbrP56481 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.87□□□□□ -0.19
CckbrP56481 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.87□□□□□ -0.19
CckbrP56481 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
CckbrP56481 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CckbrP56481 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CckbrP56481 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms