Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.89■□□□□ 0.61
Msh6P54276 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Msh6P54276 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.88■□□□□ 0.61
Msh6P54276 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Msh6P54276 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.88■□□□□ 0.61
Msh6P54276 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.88■□□□□ 0.61
Msh6P54276 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Msh6P54276 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
Msh6P54276 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Msh6P54276 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.88■□□□□ 0.61
Msh6P54276 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh6P54276 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Msh6P54276 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Msh6P54276 Gm13464-201ENSMUST00000119418 935 ntBASIC18.87■□□□□ 0.61
Msh6P54276 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.87■□□□□ 0.61
Msh6P54276 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Msh6P54276 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Msh6P54276 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh6P54276 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.86■□□□□ 0.61
Msh6P54276 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.86■□□□□ 0.61
Msh6P54276 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Msh6P54276 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.86■□□□□ 0.61
Msh6P54276 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.86■□□□□ 0.61
Msh6P54276 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.86■□□□□ 0.61
Msh6P54276 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.86■□□□□ 0.61
Msh6P54276 Gm2451-201ENSMUST00000199447 999 ntBASIC18.86■□□□□ 0.61
Msh6P54276 Gm10290-201ENSMUST00000200451 999 ntBASIC18.86■□□□□ 0.61
Msh6P54276 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Msh6P54276 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Msh6P54276 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh6P54276 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.85■□□□□ 0.61
Msh6P54276 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.85■□□□□ 0.61
Msh6P54276 Gm14127-201ENSMUST00000117906 678 ntBASIC18.85■□□□□ 0.61
Msh6P54276 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.85■□□□□ 0.61
Msh6P54276 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Msh6P54276 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
Msh6P54276 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms