Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.17■□□□□ 0.18
SqleP52019 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SqleP52019 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SqleP52019 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SqleP52019 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.16■□□□□ 0.18
SqleP52019 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SqleP52019 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Gm28911-201ENSMUST00000188837 117 ntBASIC16.16■□□□□ 0.18
SqleP52019 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.16■□□□□ 0.18
SqleP52019 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.16■□□□□ 0.18
SqleP52019 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.16■□□□□ 0.18
SqleP52019 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.16■□□□□ 0.18
SqleP52019 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SqleP52019 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.16■□□□□ 0.18
SqleP52019 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.16■□□□□ 0.18
SqleP52019 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SqleP52019 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
SqleP52019 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.15■□□□□ 0.18
SqleP52019 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SqleP52019 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SqleP52019 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.15■□□□□ 0.18
SqleP52019 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SqleP52019 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
SqleP52019 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SqleP52019 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SqleP52019 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.14■□□□□ 0.17
SqleP52019 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SqleP52019 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SqleP52019 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.14■□□□□ 0.17
SqleP52019 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.14■□□□□ 0.17
SqleP52019 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SqleP52019 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.14■□□□□ 0.17
SqleP52019 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SqleP52019 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.14■□□□□ 0.17
SqleP52019 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SqleP52019 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.14■□□□□ 0.17
SqleP52019 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms