Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.44□□□□□ -0.42
Nkx2-1P50220 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-1P50220 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Mir770-201ENSMUST00000103252 94 ntBASIC12.43□□□□□ -0.42
Nkx2-1P50220 Gm6623-201ENSMUST00000173570 544 ntBASIC12.43□□□□□ -0.42
Nkx2-1P50220 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-1P50220 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.42□□□□□ -0.42
Nkx2-1P50220 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.42□□□□□ -0.42
Nkx2-1P50220 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gm25406-201ENSMUST00000157599 105 ntBASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-1P50220 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-1P50220 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms