Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.56□□□□□ -0.24
Rfx3P48381 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx3P48381 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rfx3P48381 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.55□□□□□ -0.24
Rfx3P48381 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.55□□□□□ -0.24
Rfx3P48381 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Rfx3P48381 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.55□□□□□ -0.24
Rfx3P48381 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.55□□□□□ -0.24
Rfx3P48381 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx3P48381 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Rfx3P48381 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfx3P48381 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Rfx3P48381 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rfx3P48381 Gm7153-201ENSMUST00000117092 455 ntBASIC13.54□□□□□ -0.24
Rfx3P48381 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfx3P48381 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfx3P48381 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfx3P48381 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Rfx3P48381 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.54□□□□□ -0.24
Rfx3P48381 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.54□□□□□ -0.24
Rfx3P48381 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.54□□□□□ -0.24
Rfx3P48381 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Rfx3P48381 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.54□□□□□ -0.24
Rfx3P48381 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfx3P48381 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx3P48381 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx3P48381 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.53□□□□□ -0.24
Rfx3P48381 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rfx3P48381 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx3P48381 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Grk6-207ENSMUST00000225925 2769 ntBASIC13.53□□□□□ -0.24
Rfx3P48381 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx3P48381 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.53□□□□□ -0.24
Rfx3P48381 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx3P48381 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx3P48381 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx3P48381 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms