Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Gm16026-204ENSMUST00000162652 683 ntBASIC14.18□□□□□ -0.14
Nkx2-6P43688 Gm25948-201ENSMUST00000175334 112 ntBASIC14.18□□□□□ -0.14
Nkx2-6P43688 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Gm27430-201ENSMUST00000184585 107 ntBASIC14.17□□□□□ -0.14
Nkx2-6P43688 Gm44333-201ENSMUST00000197168 107 ntBASIC14.17□□□□□ -0.14
Nkx2-6P43688 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.17□□□□□ -0.14
Nkx2-6P43688 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-6P43688 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
Nkx2-6P43688 Gm6973-201ENSMUST00000117080 721 ntBASIC14.16□□□□□ -0.14
Nkx2-6P43688 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.16□□□□□ -0.14
Nkx2-6P43688 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Nkx2-6P43688 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-6P43688 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.15□□□□□ -0.14
Nkx2-6P43688 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Gm15693-201ENSMUST00000120470 637 ntBASIC14.15□□□□□ -0.14
Nkx2-6P43688 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Gm22175-201ENSMUST00000175007 78 ntBASIC14.15□□□□□ -0.14
Nkx2-6P43688 Gm24158-201ENSMUST00000175263 71 ntBASIC14.15□□□□□ -0.14
Nkx2-6P43688 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.15□□□□□ -0.14
Nkx2-6P43688 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms