Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.82■□□□□ 0.28
Sdc2P43407 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sdc2P43407 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.82■□□□□ 0.28
Sdc2P43407 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdc2P43407 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
Sdc2P43407 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sdc2P43407 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.81■□□□□ 0.28
Sdc2P43407 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdc2P43407 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Sdc2P43407 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Gm6089-201ENSMUST00000197666 938 ntBASIC16.81■□□□□ 0.28
Sdc2P43407 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.81■□□□□ 0.28
Sdc2P43407 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc2P43407 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sdc2P43407 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.8■□□□□ 0.28
Sdc2P43407 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sdc2P43407 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.8■□□□□ 0.28
Sdc2P43407 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Gm18489-201ENSMUST00000172565 551 ntBASIC16.8■□□□□ 0.28
Sdc2P43407 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.8■□□□□ 0.28
Sdc2P43407 Gm43347-201ENSMUST00000200226 580 ntBASIC16.8■□□□□ 0.28
Sdc2P43407 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.8■□□□□ 0.28
Sdc2P43407 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sdc2P43407 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc2P43407 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.79■□□□□ 0.28
Sdc2P43407 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.79■□□□□ 0.28
Sdc2P43407 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Sdc2P43407 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.79■□□□□ 0.28
Sdc2P43407 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.79■□□□□ 0.28
Sdc2P43407 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.79■□□□□ 0.28
Sdc2P43407 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.79■□□□□ 0.28
Sdc2P43407 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms