Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.16□□□□□ -0.14
Cdx2P43241 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdx2P43241 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.16□□□□□ -0.14
Cdx2P43241 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdx2P43241 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdx2P43241 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdx2P43241 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdx2P43241 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdx2P43241 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cdx2P43241 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cdx2P43241 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cdx2P43241 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdx2P43241 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdx2P43241 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdx2P43241 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdx2P43241 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdx2P43241 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx2P43241 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.15□□□□□ -0.15
Cdx2P43241 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Asic1-205ENSMUST00000228185 1818 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.14□□□□□ -0.15
Cdx2P43241 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdx2P43241 Gm46209-201ENSMUST00000217912 553 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdx2P43241 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms