Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Hmx3P42581 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmx3P42581 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Gm44430-201ENSMUST00000203376 995 ntBASIC12.56□□□□□ -0.4
Hmx3P42581 Gm5587-201ENSMUST00000206270 674 ntBASIC12.56□□□□□ -0.4
Hmx3P42581 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmx3P42581 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmx3P42581 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmx3P42581 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Hmx3P42581 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hmx3P42581 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.56□□□□□ -0.4
Hmx3P42581 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hmx3P42581 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmx3P42581 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hmx3P42581 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Gm6345-202ENSMUST00000180900 204 ntBASIC12.55□□□□□ -0.4
Hmx3P42581 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.55□□□□□ -0.4
Hmx3P42581 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hmx3P42581 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.55□□□□□ -0.4
Hmx3P42581 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hmx3P42581 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hmx3P42581 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmx3P42581 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmx3P42581 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hmx3P42581 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.54□□□□□ -0.4
Hmx3P42581 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.54□□□□□ -0.4
Hmx3P42581 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Hmx3P42581 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.54□□□□□ -0.4
Hmx3P42581 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.54□□□□□ -0.4
Hmx3P42581 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmx3P42581 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hmx3P42581 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hmx3P42581 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmx3P42581 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.53□□□□□ -0.4
Hmx3P42581 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmx3P42581 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hmx3P42581 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms