Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.1□□□□□ -0.15
Sox6P40645 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.09□□□□□ -0.15
Sox6P40645 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Sox6P40645 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sox6P40645 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox6P40645 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Sox6P40645 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox6P40645 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox6P40645 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox6P40645 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.09□□□□□ -0.15
Sox6P40645 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox6P40645 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.08□□□□□ -0.15
Sox6P40645 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox6P40645 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Sox6P40645 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Sox6P40645 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.08□□□□□ -0.16
Sox6P40645 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Sox6P40645 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.08□□□□□ -0.16
Sox6P40645 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox6P40645 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.08□□□□□ -0.16
Sox6P40645 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sox6P40645 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.07□□□□□ -0.16
Sox6P40645 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.07□□□□□ -0.16
Sox6P40645 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Sox6P40645 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox6P40645 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox6P40645 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox6P40645 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox6P40645 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox6P40645 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox6P40645 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox6P40645 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox6P40645 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms