Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cxcl12P40224 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.35■□□□□ 0.05
Cxcl12P40224 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.35■□□□□ 0.05
Cxcl12P40224 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.34■□□□□ 0.05
Cxcl12P40224 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.34■□□□□ 0.05
Cxcl12P40224 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cxcl12P40224 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl12P40224 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cxcl12P40224 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.33■□□□□ 0.05
Cxcl12P40224 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cxcl12P40224 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cxcl12P40224 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cxcl12P40224 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cxcl12P40224 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cxcl12P40224 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cxcl12P40224 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.33■□□□□ 0.04
Cxcl12P40224 Mir1982-201ENSMUST00000157368 74 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Gm45098-201ENSMUST00000207179 657 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 Gm45453-201ENSMUST00000211758 853 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.33■□□□□ 0.04
Cxcl12P40224 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.33■□□□□ 0.04
Cxcl12P40224 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cxcl12P40224 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.33■□□□□ 0.04
Cxcl12P40224 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl12P40224 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl12P40224 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl12P40224 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl12P40224 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms