Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Slc6a1P31648 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.92□□□□□ -0.34
Slc6a1P31648 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Slc6a1P31648 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a1P31648 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.91□□□□□ -0.34
Slc6a1P31648 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.91□□□□□ -0.34
Slc6a1P31648 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.91□□□□□ -0.34
Slc6a1P31648 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a1P31648 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a1P31648 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.9□□□□□ -0.34
Slc6a1P31648 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Gm6623-201ENSMUST00000173570 544 ntBASIC12.9□□□□□ -0.34
Slc6a1P31648 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Carlr-201ENSMUST00000181515 2574 ntBASIC12.9□□□□□ -0.34
Slc6a1P31648 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms