Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Col2a1P28481 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.83■□□□□ 0.28
Col2a1P28481 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.83■□□□□ 0.28
Col2a1P28481 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.83■□□□□ 0.28
Col2a1P28481 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col2a1P28481 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.82■□□□□ 0.28
Col2a1P28481 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.82■□□□□ 0.28
Col2a1P28481 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.82■□□□□ 0.28
Col2a1P28481 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col2a1P28481 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col2a1P28481 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Col2a1P28481 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col2a1P28481 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Gm14042-201ENSMUST00000120139 833 ntBASIC16.81■□□□□ 0.28
Col2a1P28481 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.81■□□□□ 0.28
Col2a1P28481 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Gm16215-201ENSMUST00000161990 637 ntBASIC16.81■□□□□ 0.28
Col2a1P28481 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.81■□□□□ 0.28
Col2a1P28481 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col2a1P28481 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.81■□□□□ 0.28
Col2a1P28481 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.81■□□□□ 0.28
Col2a1P28481 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col2a1P28481 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col2a1P28481 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col2a1P28481 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.8■□□□□ 0.28
Col2a1P28481 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col2a1P28481 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col2a1P28481 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col2a1P28481 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Col2a1P28481 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.8■□□□□ 0.28
Col2a1P28481 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.8■□□□□ 0.28
Col2a1P28481 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col2a1P28481 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col2a1P28481 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms