Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.83□□□□□ -0.2
Cd40lgP27548 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.83□□□□□ -0.2
Cd40lgP27548 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cd40lgP27548 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cd40lgP27548 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm14140-201ENSMUST00000119999 995 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm12260-201ENSMUST00000122447 411 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm9682-201ENSMUST00000197505 556 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm45167-201ENSMUST00000208007 322 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.82□□□□□ -0.2
Cd40lgP27548 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.82□□□□□ -0.2
Cd40lgP27548 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.82□□□□□ -0.2
Cd40lgP27548 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cd40lgP27548 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Cd40lgP27548 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cd40lgP27548 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.81□□□□□ -0.2
Cd40lgP27548 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.81□□□□□ -0.2
Cd40lgP27548 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm5682-201ENSMUST00000173402 505 ntBASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.81□□□□□ -0.2
Cd40lgP27548 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.81□□□□□ -0.2
Cd40lgP27548 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms