Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm3P21107 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm3P21107 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm3P21107 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm3P21107 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Tpm3P21107 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm3P21107 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.8■□□□□ 0.28
Tpm3P21107 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Carlr-201ENSMUST00000181515 2574 ntBASIC16.8■□□□□ 0.28
Tpm3P21107 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.8■□□□□ 0.28
Tpm3P21107 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm3P21107 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.8■□□□□ 0.28
Tpm3P21107 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.8■□□□□ 0.28
Tpm3P21107 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm3P21107 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm3P21107 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm37055-201ENSMUST00000191866 133 ntBASIC16.79■□□□□ 0.28
Tpm3P21107 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.79■□□□□ 0.28
Tpm3P21107 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Tpm3P21107 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tpm3P21107 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpm3P21107 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tpm3P21107 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.79■□□□□ 0.28
Tpm3P21107 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.79■□□□□ 0.28
Tpm3P21107 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpm3P21107 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm3P21107 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.78■□□□□ 0.28
Tpm3P21107 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Tpm3P21107 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm3P21107 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Tpm3P21107 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Tpm3P21107 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Gm13559-201ENSMUST00000120476 863 ntBASIC16.77■□□□□ 0.28
Tpm3P21107 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Gm27011-201ENSMUST00000182352 972 ntBASIC16.77■□□□□ 0.28
Tpm3P21107 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.77■□□□□ 0.28
Tpm3P21107 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm3P21107 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms