Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf9P20334 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf9P20334 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf9P20334 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Gm11764-201ENSMUST00000120221 623 ntBASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf9P20334 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.25□□□□□ -0.45
Tnfrsf9P20334 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms