Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hmga1P17095 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm13223-201ENSMUST00000118609 747 ntBASIC15.26■□□□□ 0.03
Hmga1P17095 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm38294-201ENSMUST00000192831 381 ntBASIC15.26■□□□□ 0.03
Hmga1P17095 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Hmga1P17095 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmga1P17095 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.26■□□□□ 0.03
Hmga1P17095 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hmga1P17095 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hmga1P17095 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga1P17095 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.25■□□□□ 0.03
Hmga1P17095 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmga1P17095 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Gm8749-201ENSMUST00000117737 331 ntBASIC15.25■□□□□ 0.03
Hmga1P17095 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmga1P17095 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.25■□□□□ 0.03
Hmga1P17095 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.25■□□□□ 0.03
Hmga1P17095 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hmga1P17095 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hmga1P17095 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga1P17095 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hmga1P17095 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.24■□□□□ 0.03
Hmga1P17095 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.24■□□□□ 0.03
Hmga1P17095 Gm28630-201ENSMUST00000187806 498 ntBASIC15.24■□□□□ 0.03
Hmga1P17095 Gm2451-201ENSMUST00000199447 999 ntBASIC15.24■□□□□ 0.03
Hmga1P17095 Gm10290-201ENSMUST00000200451 999 ntBASIC15.24■□□□□ 0.03
Hmga1P17095 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga1P17095 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmga1P17095 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga1P17095 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms