Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.42□□□□□ -0.42
Cxcl1P12850 AA414768-201ENSMUST00000121924 1257 ntBASIC12.42□□□□□ -0.42
Cxcl1P12850 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.42□□□□□ -0.42
Cxcl1P12850 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cxcl1P12850 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.42□□□□□ -0.42
Cxcl1P12850 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cxcl1P12850 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcl1P12850 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl1P12850 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cxcl1P12850 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.41□□□□□ -0.42
Cxcl1P12850 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl1P12850 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcl1P12850 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Gm43767-201ENSMUST00000198933 381 ntBASIC12.4□□□□□ -0.42
Cxcl1P12850 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl1P12850 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl1P12850 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl1P12850 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl1P12850 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl1P12850 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl1P12850 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl1P12850 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl1P12850 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl1P12850 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl1P12850 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms